MKV is the format that hoards: video, a dozen audio tracks and every subtitle, all in one box. It was born in 2002, the open-source Matroska project, and its real weak spot is playing on TVs, iPhones and editors that never learned to open the box.
OGG is the free spirit of audio: open, patent-free, and quietly brilliant at looping game sound. A container usually carrying Vorbis or Opus audio, both open and royalty-free. That makes it the right destination when what you need is games and open projects that want seamless loops and zero licensing strings.